{"id":33825,"uuid":"446","full_name":"phim/sravel/PodiumASM","owner":"phim","description":"Long-read sequencing is a highly accurate approach that can be used to\r\nchallenging genomes, such as those containing stretches of highly\r\nrepetitive elements and lot of structural variant. Long read sequencing can also\r\nbe used to generate de novo assembly and genome finishing applications\r\nLot of tools are used to make genome assembly with long reads every day\r\nand sometimes you don't know wich Assembler tool is the best for\r\nyour organism.\r\nPodiumASM is here for you ! PodiumASM is is an open-source, scalable, modulable and traceable snakemake pipeline, able to compare multiple long read assemblies obtained from multiple assemblers tools. The workflow PodiumASM can help you to choose the best assemblies among all possibilities.","archived":null,"fork":false,"pushed_at":null,"size":null,"stargazers_count":1,"open_issues_count":null,"forks_count":0,"subscribers_count":null,"default_branch":"main","last_synced_at":"2024-10-22T03:37:50.297Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":null,"has_issues":null,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":null,"icon_url":"https://forge.ird.fr/uploads/-/system/project/avatar/446/PodiumASM_logo__copie_.png","metadata":{},"created_at":"2022-08-31T09:22:10.084Z","updated_at":"2024-04-09T12:39:25.816Z","dependencies_parsed_at":"2024-10-19T09:05:57.672Z","dependency_job_id":null,"html_url":"https://forge.ird.fr/phim/sravel/PodiumASM","commit_stats":null,"previous_names":["phim/sravel/podiumasm"],"tags_count":0,"template":null,"template_full_name":null,"repository_url":"https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr/repositories/phim%2Fsravel%2FPodiumASM","tags_url":"https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr/repositories/phim%2Fsravel%2FPodiumASM/tags","releases_url":"https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr/repositories/phim%2Fsravel%2FPodiumASM/releases","manifests_url":"https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr/repositories/phim%2Fsravel%2FPodiumASM/manifests","owner_url":"https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr/owners/phim","download_url":"https://forge.ird.fr/phim/sravel/PodiumASM/-/archive/main/PodiumASM-main.zip","host":{"name":"forge.ird.fr","url":"https://forge.ird.fr","kind":"gitlab","repositories_count":134,"owners_count":17,"icon_url":"https://github.com/gitlab.png","version":null,"created_at":"2024-05-15T14:58:09.167Z","updated_at":"2024-05-15T14:59:57.321Z","host_url":"https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr","repositories_url":"https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr/repositories","repository_names_url":"https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr/repository_names","owners_url":"https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr/owners"}}