GitHub / ifremer-bioinformatics 13 Repositories
Home page of tools made by Ifremer's Bioinformatics Core Facility (SeBiMER)
ifremer-bioinformatics/samba 📦
Standardized and Automated MetaBarcoding Analyses workflow (Mirror)
Language: Nextflow - Size: 109 MB - Last synced at: 5 days ago - Pushed at: almost 2 years ago - Stars: 12 - Forks: 5

ifremer-bioinformatics/tools-iuc Fork of galaxyproject/tools-iuc
Fork of Tool Shed repositories maintained by the Intergalactic Utilities Commission
Size: 1.29 GB - Last synced at: 5 days ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

ifremer-bioinformatics/ToolDirectory
Dynamic visualization of softwares managed by a Bioinformatics Core Facility
Language: Python - Size: 2.24 MB - Last synced at: 5 days ago - Pushed at: about 2 years ago - Stars: 4 - Forks: 1

ifremer-bioinformatics/orson 📦
Workflow for prOteome and tRanScriptome functiOnal aNnotation. CAUTION : project has moved to Gitlab.
Language: Nextflow - Size: 1.2 MB - Last synced at: 5 days ago - Pushed at: about 2 years ago - Stars: 5 - Forks: 3

ifremer-bioinformatics/ifremer-bioinformatics.github.io
public web site of SeBiMER on Github
Language: JavaScript - Size: 144 MB - Last synced at: 5 days ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 2

ifremer-bioinformatics/celia
Language: Python - Size: 351 KB - Last synced at: 5 days ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0

ifremer-bioinformatics/BeeDeeM-Tools 📦
Sequence management tools relying on the Bioinformatics Databank Manager System, BeeDeeM (miror).
Language: Java - Size: 23 MB - Last synced at: 5 days ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

ifremer-bioinformatics/Katalog
The Katalog library aims at displaying list of softwares (or databanks) using facetted data visualization system
Language: JavaScript - Size: 8.43 MB - Last synced at: 5 days ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

ifremer-bioinformatics/FLORA
workFLOw for Rnaseq analyses of the Amocyst project
Language: Nextflow - Size: 34.5 MB - Last synced at: 5 days ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 1

ifremer-bioinformatics/omics-catalog
A FAIR toolkit for fast visualization of omics data and metadata
Language: JavaScript - Size: 10.1 MB - Last synced at: 5 days ago - Pushed at: about 2 years ago - Stars: 4 - Forks: 0

ifremer-bioinformatics/pallor
Language: Nextflow - Size: 25.3 MB - Last synced at: 5 days ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 1

ifremer-bioinformatics/Keshif Fork of adilyalcin/Keshif
Keshif - Data Made Explorable (Prototype)
Size: 109 MB - Last synced at: 5 days ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

ifremer-bioinformatics/BLAST-PLAST-bench
Scripts to run benchmarks of BLAST and PLAST on a supercomputer
Language: Shell - Size: 144 KB - Last synced at: 5 days ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
