GitHub / lias-laboratory / biogitom
BioGITOM: Matching Biomedical Ontologies with Graph Isomorphism Transformer
JSON API: https://data.code.gouv.fr/api/v1/hosts/GitHub/repositories/lias-laboratory%2Fbiogitom
Stars: 16
Forks: 0
Open issues: 0
License: mit
Language: Jupyter Notebook
Size: 6.42 MB
Dependencies parsed at:
14
Created at: 6 months ago
Updated at: about 1 month ago
Pushed at: about 1 month ago
Last synced at: 5 days ago
Topics: biomedical-ontologies, deep-learning, graph-isomorphism-transformer, graph-neural-networks, graph-transformer, ontology-matching
requirements.txt
pypi
- beautifulsoup4 ==4.12.3
- deeponto ==0.9.2
- lxml ==5.2.1
- matplotlib ==3.8.4
- networkx ==3.3
- numpy <2.0
- owlready2 ==0.47
- pandas ==2.2.2
- rdflib ==7.0.0
- scikit-learn ==1.4.2
- torch ==2.0.0
- torch_geometric ==2.4.0
- tqdm ==4.66.4
- transformers ==4.45.2