forgemia.inra.fr / umr-gdec 16 Repositories
Projects of UMR Génétique Diversité et Ecophysiologie des Céréales. https://www6.clermont.inra.fr/umr1095 Contacts: <frederic.choulet@inra.fr> <helene.rimbert@inra.fr> <pauline.lasserre-zuber@inrae.fr> <fabien.leloup@inrae.fr>
umr-gdec/magatt
Pipeline used to tranfert gene annotation (GFF3) between different versions of assemblies.
Last synced at: 5 months ago - Stars: 2 - Forks: 0
umr-gdec/ateliers-codons
Last synced at: over 1 year ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
umr-gdec/agr-ancestral-genome-reconstruction
Last synced at: over 1 year ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
umr-gdec/omics-integration-on-poplar
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
umr-gdec/nf-remapmarkers
scripts to remap markers as pairs of bait sequences or context sequences.
Last synced at: 7 months ago - Stars: 1 - Forks: 1
umr-gdec/bwgs
Package for BreedWheat Genomic Selection pipeline
Last synced at: 5 months ago - Stars: 0 - Forks: 0
umr-gdec/scripts_files
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
umr-gdec/gps
Scripts used in: "Integration of genomic selection into winter-type bread wheat breeding schemes: a simulation pipeline including economic constraints" S. Ben-Sadoun, A. Fugeray-Scarbel, J. Auzanneau, G. Charmet, S. Lemarié, S. Bouchet
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
umr-gdec/isbpfinder
isbpFinder is a Perl script dedicated to design ISBP (Insertion Site Based Polymorphism) markers.
Last synced at: 5 months ago - Stars: 0 - Forks: 0
umr-gdec/clari-te
"clariTE.pl" is a program that post process the xm output file of RepeatMasker.
Last synced at: 5 months ago - Stars: 0 - Forks: 0