forgemia.inra.fr / urgi-anagen / panREPET
panREPET is a pipeline detecting shared Transposable Element (TE) insertions among a pangenome. It takes in charge multiple de novo whole-genome assemblies of the same species. It compares TE copies between each pair of genomes then identifies TE copies shared by a group of individuals.
JSON API: https://data.code.gouv.fr/api/v1/hosts/forgemia.inra.fr/repositories/urgi-anagen%2FpanREPET
Stars: 2
Forks: 0
Open issues:
License: cecill-2.0
Language:
Dependencies parsed at: Pending
Created at: about 5 years ago
Updated at: 6 months ago
Last synced at: 6 months ago
Loading...