forgemia.inra.fr
singularity/microservices/thaliadb
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
singularity/microservices/apache2
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
singularity/prebuilt/r-essentials.3.6_conda
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
pappso/i2masschroq
i2MassChroQ (identification & inference -- mass chromatogram quantification) is the successor of X!TandemPipeline-Java. Following a full rewrite in C++17 and integration of the MassChroQ module, i2MassChroQ features a quantitative proteomics solution
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
pappso/libmassgui
libmassgui is a C++ static library that is referenced from other projects. The libmassgui static library is designed to enshrine the gui functionalities needed by the following two projects: msXpertSuite/massXpert; msXpertSuite/mineXpert2. libmassgui has a companion GUI library, libmass , that is designed to enshrine the non-GUI functionalities needed by the same two projects above.
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
pappso/specoms
C++ implementation of SpecOMS and new developments
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
gt-maiia/journees-thematiques-2023
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
singularity/bioinfo/samtools_v.1.9
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
singularity/prebuilt/r-essentials.3.6_mkl_conda
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
lbe/typol/typol_usetox/cf-from-ef3.1-computations
Last synced at: 7 months ago - Stars: 0 - Forks: 0
lbe/sequencing/2022-axel-rous/article_polarizedcathodeenrichment
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
stics-formation/sticsrpacks-binder
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
imhorphen/multvardiv
Multivariate generalized Gaussian distribution, Multivariate Cauchy distribution, Multivariate t distribution. Distance between two distributions. Manipulation of these multivariate probability distributions.
Last synced at: 7 months ago - Stars: 0 - Forks: 0
imhorphen/mggd
An R package for distance between multivariate generalised Gaussian distributions (MGGD), manipulation of MGGD.
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
tropo-group/notebook
Notebooks Jupyter
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
singularity/bioinfo/bcftools_v1.11
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
emfeed-sys-admin/vm-server-compagnon
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
record-open-archives/groundwaternitrogen
pubilc repository for the GroundWaterNitrogen nitrogen content in groundwater model developped during the ATCHA project model documentation: https://record-open-archives.pages.mia.inra.fr/groundwaternitrogen/
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
record-open-archives/pump-potential
pubilc repository for the PumpPotential pump flow model developped during the ATCHA project model documentation: https://record-open-archives.pages.mia.inra.fr/pump-potential/
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
in-wop/in-wop
Project for generating the IN-WOP main website
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
in-wop/seinebasin2
Seine River Basin modelling
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
in-wop/sgldatagrabber
R package for grabbing data from Seine Grands Lacs web site (https://seinegrandslacs.fr/fr/quatre-lacs-reservoirs-au-coeur-dun-bassin) and store them on a Thingsboard IoT platform (https://thingsboard.io/).
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
in-wop/irmara
Interactive Reservoir MAnagement Risk Assessment (IRMaRA) is a R Shiny interface providing probability of failure of flood and drought objective at key locations downstream of the 4 lakes regulating the Seine River.
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
scales/differential-analysis-of-trees
Repository code for the article: Neuvial Pierre, Randriamihamison Nathanaël, Chavent Marie, Foissac Sylvain, and Vialaneix Nathalie (2023) A two-sample tree-based test for hierarchically organized genomic signals. Preprint.
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
urgi-is/datadiscovery_partners_indexers
Collection of indexer for FAIDARE, WheatIS,
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
formationcalcul2022/formation-module-virtualenv-conda
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
mix-enable/mix-enable_positive-deviance
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
genotoul-bioinfo/ngspipelines
NGSPipelines integrates pipelines and user interfaces to help biologists to analyse data outputed from biological applications such as RNA-seq, sRNA-seq, Chip-Seq, BS-seq, and so on.
Last synced at: 5 months ago - Stars: 0 - Forks: 0
cati-prosodie/fair4rs-fr
Traduction française des FAIR4RS Principles (voir README)
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 2 - Forks: 0
GNet/high-dimensional_regression_comparison
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
pepi-atelier-singularity/atelierforge
Atelier Forge du séminaire CATI/PEPI/Pépinières
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
cati-empreinte-public/about-us
A page on CATI EMPREINTE
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
asterics/asterics-issues
This project is meant to report bugs or suggestions for the tool ASTERICS. If you don't have a forgemia account : you can find the PUBLIC VERSION of the issues here https://github.com/astericsInrae/asterics-issues. You can also send an email : asterics-tlse@inrae.fr
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
stacomi/stacomijava/stacomi-java
Code for JAVA app for stacomi
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
bioswimmers/swim-infer
Companion code to the publication 'Inferring characteristics of bacterial swimming in biofilm matrix from time-lapse confocal laser scanning microscopy', Ravel et al.
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
decrypt/deterministic-model
Implementation of the deterministic model of the intestinal including microbiota, as described in Darrigade et al., 'A PDMP model of the epithelial cell turn-over in the intestinal crypt including microbiota-derived regulations.' (2021).
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
mpm-at-recover/cbgeo
This project is a custom version of CB-Geo MPM.
Last synced at: 7 months ago - Stars: 0 - Forks: 0
in-sylva-development/metadatastandardandttools/metadatavalidation/in-sylvajsonschemavalidator
Application python pour controler la conformité d'un fichier json en fournissant un schéma json.
Last synced at: 7 months ago - Stars: 0 - Forks: 0
orfeo-toolbox/otb-mlutils
A set of OTB applications for Machine Learning
Last synced at: 7 months ago - Stars: 0 - Forks: 0
orfeo-toolbox/otbonnx
Run deep learning models from pytorch, tensorflow, keras, Caffe2, Microsoft Cognitive Toolkit, Apache MXNet, etc
Last synced at: 7 months ago - Stars: 0 - Forks: 0
pepiniere-jouy/detecteur_co2
Code de l'ESP32 utilisé dans le cadre du projet détecteur de CO2 https://jouy.pepiniere.inrae.fr/#!/projects/detecteur-co2-pour-inciter-a-l-aeration-des-locaux
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
pepiniere-jouy/mode_emploi_detecteur_co2
Notice Utilisation Détecteur CO2
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
urgi-anagen/panREPET
panREPET is a pipeline detecting shared Transposable Element (TE) insertions among a pangenome. It takes in charge multiple de novo whole-genome assemblies of the same species. It compares TE copies between each pair of genomes then identifies TE copies shared by a group of individuals.
Last synced at: 6 months ago - Stars: 2 - Forks: 0
umrf/anomaly
Ensemble de scripts utilisés au LRF pour traiter les données d'amplicon sequencing 16S et ITS.
Last synced at: 5 months ago - Stars: 2 - Forks: 0
gqe-acep/sesam
The SeSAM R package allows fully automatic construction of two successive genetic maps: a first one including an optimized subset of markers ensuring the robustness of orders to a given statistical threshold, and a second one including almost all polymorphic markers. It can handle all common types of biparental mapping populations, including progenies obtained from crossing heterozygous parents. In addition to the automatic procedure, SeSAM includes many functions for interactive mapping, file formats conversions, and generates many graphs useful to assess the quality of data and maps.
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
most/ib-rs
Nous décrivons ici un code Python développé par notre groupe et que nous mettons à disposition de la communauté
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
4p/tools/4p-python-library
Python library providing a variety of useful functions for 4P modules
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mpm-at-recover/pycbg
A Python scripting interface for CB-Geo MPM
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
orfeo-toolbox/otb-simpleextractiontools
Utils for RS data objects manipulation (extents, etc.)
Last synced at: 7 months ago - Stars: 0 - Forks: 0
orfeo-toolbox/otbtf
The Orfeo ToolBox (OTB) extension for Deep Learning. Enable the use of TensorFlow models on Remote Sensing images. Provides OTB applications for patches sampling, model training, model inference, hybrid models, and so on.
Last synced at: 7 months ago - Stars: 0 - Forks: 0
orfeo-toolbox/pyotb
pyotb is a library that enables easy use of the Orfeo Tool Box (OTB) in Python
Last synced at: 7 months ago - Stars: 2 - Forks: 0
umr-1202-biogeco/initiation_git
A short introduction to git for research for BIOGECO students
Last synced at: 7 months ago - Stars: 0 - Forks: 0
chemhousebas/octave/covsel
Covsel related functions and data
Last synced at: 6 months ago - Stars: 0 - Forks: 0
in-sylva-development/in-sylva.search.app
search.app is used by package search, and implement search processes
Last synced at: 5 months ago - Stars: 0 - Forks: 0
baric/quarto-shiny-sk8
Développement d’une petite application Shiny et déploiement de celle-ci avec sk8, animé par Amandine Velt (SVQV) et Joseph Tran (EGFV) [AG CATI BARIC La Rochelle, 26-28/03/2024] slides: https://baric.pages.mia.inra.fr/quarto-shiny-sk8 tutoriel: https://forgemia.inra.fr/baric/shiny-tutorial
Last synced at: 7 months ago - Stars: 0 - Forks: 0
orfeo-toolbox/docker/otb-deep-light
OTB/ONNX from nvidia/cuda image
Last synced at: 7 months ago - Stars: 0 - Forks: 0
urep/docs/bonpland
BONnes Pratiques sur LA gestioN des Données : https://urep.pages.mia.inra.fr/docs/bonpland
Last synced at: 6 months ago - Stars: 0 - Forks: 0
urep/soere-pp/doc_soere-pp
Documentation pour le SI SOERE Prairies Permanentes : https://urep.pages.mia.inra.fr/soere-pp/doc_soere-pp
Last synced at: 6 months ago - Stars: 0 - Forks: 0
gaev/gaev
Le projet Gestion Automatique d'Environnement Virtuel.
Last synced at: 6 months ago - Stars: 4 - Forks: 0
couplimspec/couplimspec_20150113
Version du projet stockée sur forge Plastic, correspondant aux modifs faites lors de la réunion du 12 ou 13 janvier 2015.
Last synced at: 6 months ago - Stars: 0 - Forks: 0
gryc-data/saccharomyces_cerevisiae-s288c
Saccharomyces cerevisiae S288c complete genome and annotation data.
Last synced at: 6 months ago - Stars: 0 - Forks: 0
gryc-data/lachancea_lanzarotensis-cbs_12615
Lachancea lanzarotensis CBS 12615 complete genome and annotation data.
Last synced at: 6 months ago - Stars: 0 - Forks: 0
baric/family-companion
Family-Companion: analyse, visualise, browse, query and share your homology clusters Ludovic Cottret, Corinne Rancurel, Martial Briand, Sebastien Carrere BioArxiv, doi: https://doi.org/10.1101/266742
Last synced at: 6 months ago - Stars: 0 - Forks: 0
umr-astre/training/notions_stats
Stage de formation : « Notions de base en statistiques ». https://umr-astre.pages.mia.inra.fr/training/notions_stats/
Last synced at: 6 months ago - Stars: 0 - Forks: 0
couplimspec/hyiam
Boîte à outils Matlab pour la manipulation d'images hyperspectrales
Last synced at: 6 months ago - Stars: 0 - Forks: 0
lbe/opensilexlbe/opensilex-dev
Projet regroupant les codes de l'outil opensilex, systèmes d'Information ouverts pilotés par des ontologies
Last synced at: 6 months ago - Stars: 0 - Forks: 2