Topic: "R-package"
umrf/ranomaly
https://umrf.pages.mia.inra.fr/ranomaly/
Last synced at: 5 months ago - Stars: 2 - Forks: 2
genotoul-bioinfo/mixKernel
mixKernel is a multiple kernel framework that allows to integrate multiple datasets of various types into a single analysis. The package is published on CRAN: https://cran.r-project.org/package=mixKernel
Last synced at: 5 months ago - Stars: 1 - Forks: 0
umr-boa/viseago
ViSEAGO: Easier data mining of biological functions organized into clusters using Gene Ontology and semantic similarity. **Vi**sualization, **S**emantic similarity and **E**nrichment **A**nalysis of **G**ene **O**ntology.
Last synced at: 5 months ago - Stars: 1 - Forks: 0
gqe-acep/sesam
The SeSAM R package allows fully automatic construction of two successive genetic maps: a first one including an optimized subset of markers ensuring the robustness of orders to a given statistical threshold, and a second one including almost all polymorphic markers. It can handle all common types of biparental mapping populations, including progenies obtained from crossing heterozygous parents. In addition to the automatic procedure, SeSAM includes many functions for interactive mapping, file formats conversions, and generates many graphs useful to assess the quality of data and maps.
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
umr-astre/nimbletempdev
R package for modelling arthropod development rates (mean and variance) as a function of temperature in nimble. Adapted from the PhD work of Soledad Castano (http://www.theses.fr/223623849).
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
umr-astre/sit
Analyse mark-release-recapture data from Sterile Insect Technique (SIT) field experiments. https://umr-astre.pages.mia.inra.fr/sit
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
umr-astre/sit-design
Requirements and design of a R package for analysing data from Mark-Capture-Recapture experiments for the effective management of invasive _Aedes_ mosquitoes.
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
umr-astre/geonetwork
Networks/graphs with geo-localised nodes https://umr-astre.pages.mia.inra.fr/geonetwork/
Last synced at: 5 months ago - Stars: 0 - Forks: 0
umr-astre/mapMCDA
Produce an epidemiological risk map by weighting multiple risk factors. https://umr-astre.pages.mia.inra.fr/mapMCDA/
Last synced at: 5 months ago - Stars: 0 - Forks: 0
umr-astre/spreadrate
Estimate the spread-rate of epidemics https://umr-astre.pages.mia.inra.fr/spreadrate/
Last synced at: 5 months ago - Stars: 0 - Forks: 0