metexplore/cbm/fvabiomarkers

Juliette's internship project

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metexplore/cbm/samba-project/sambar-shiny

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metexplore/cbm/dexom

Diversity-based enumeration of optimal context-specific metabolic networks

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metexplore/cbm/samba-project/sambaflux

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metexplore/cbm/pva

pathway variability analysis using the miom library

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metexplore/cbm/met4j-dynamicrfba-singularity

Dynamic RFBA. Inspired by https://www.sciencedirect.com/science/article/pii/S0022519301924051?via%3Dihub.

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metexplore/cbm/samba-project/sambar.lite

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metexplore/cbm/met4j-flux-obsolete

Obsolete. This modular version was not easy to manage. See packages in orgemia.inra.fr/metexplore/cbm/met4j-flux

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metexplore/cbm/dexom-python

diversity-based enumeration of optimal context-specific metabolic networks using the cobrapy library github mirror: https://github.com/MetExplore/dexom-python

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metexplore/cbm/MANA

MANA: mMoA identification Assisted by modelling and Network Analysis. Code and test case for the following article : A strategy to detect metabolic changes induced by exposure to chemicals from large sets of condition-specific metabolic models computed with enumeration techniques

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metexplore/cbm/samba-project/sambar

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metexplore/cbm/ocmmed

Obtaining cell-specific metabolic models through enumeration with DEXOM

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metexplore/cbm/samba-project/samba

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