forgemia.inra.fr / bioswimmers / swim-infer
Companion code to the publication 'Inferring characteristics of bacterial swimming in biofilm matrix from time-lapse confocal laser scanning microscopy', Ravel et al.
JSON API: https://data.code.gouv.fr/api/v1/hosts/forgemia.inra.fr/repositories/bioswimmers%2Fswim-infer
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License: gpl-3.0+
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Dependencies parsed at:
94
Created at: over 3 years ago
Updated at: about 2 years ago
Pushed at: 11 months ago
Last synced at: 7 months ago
requirements.txt
pypi
- Cython ==0.29.25
- Jinja2 ==3.0.3
- MarkupSafe ==2.0.1
- Pillow ==8.4.0
- Pygments ==2.10.0
- QtPy ==1.11.3
- Send2Trash ==1.8.0
- aiohttp ==3.8.1
- aiosignal ==1.2.0
- appdirs ==1.4.4
- argon2-cffi ==21.1.0
- async-timeout ==4.0.1
- attrs ==21.2.0
- backcall ==0.2.0
- bleach ==4.1.0
- cffi ==1.15.0
- charset-normalizer ==2.0.9
- clikit ==0.6.2
- crashtest ==0.3.1
- cycler ==0.11.0
- debugpy ==1.5.1
- decorator ==5.1.0
- defusedxml ==0.7.1
- entrypoints ==0.3
- fonttools ==4.28.3
- frozenlist ==1.2.0
- h5py ==3.6.0
- httpstan ==4.4.2
- idna ==3.3
- imageio ==2.13.1
- importlib-resources ==5.4.0
- ipykernel ==6.6.0
- ipython ==7.30.1
- ipython-genutils ==0.2.0
- ipywidgets ==7.6.5
- jedi ==0.18.1
- jsonschema ==4.2.1
- jupyter ==1.0.0
- jupyter-client ==7.1.0
- jupyter-console ==6.4.0
- jupyter-core ==4.9.1
- jupyter-latex-envs ==1.4.6
- jupyterlab-pygments ==0.1.2
- jupyterlab-widgets ==1.0.2
- kiwisolver ==1.3.2
- lz4 ==3.1.10
- marshmallow ==3.14.1
- matplotlib ==3.5.0
- matplotlib-inline ==0.1.3
- mistune ==0.8.4
- multidict ==5.2.0
- nbclient ==0.5.9
- nbconvert ==6.3.0
- nbformat ==5.1.3
- nest-asyncio ==1.5.4
- notebook ==6.4.6
- numpy ==1.21.4
- packaging ==21.3
- pandas ==1.3.4
- pandocfilters ==1.5.0
- parso ==0.8.3
- pastel ==0.2.1
- pexpect ==4.8.0
- pickleshare ==0.7.5
- prometheus-client ==0.12.0
- prompt-toolkit ==3.0.23
- ptyprocess ==0.7.0
- pycparser ==2.21
- pylev ==1.4.0
- pyparsing ==3.0.6
- pyrsistent ==0.18.0
- pysimdjson ==3.2.0
- pystan ==2.19.0.0
- python-dateutil ==2.8.2
- python-ternary ==1.0.8
- pytz ==2021.3
- pyzmq ==22.3.0
- qtconsole ==5.2.1
- scipy ==1.7.3
- seaborn ==0.11.2
- setuptools-scm ==6.3.2
- six ==1.16.0
- terminado ==0.12.1
- testpath ==0.5.0
- tomli ==1.2.2
- tornado ==6.1
- traitlets ==5.1.1
- typing_extensions ==4.0.1
- wcwidth ==0.2.5
- webargs ==7.0.1
- webencodings ==0.5.1
- widgetsnbextension ==3.5.2
- yarl ==1.7.2
- zipp ==3.6.0