dipwmsearch

This package provides efficient functions to search for one kind of probabilistic motifs known as di-nucleotidic Position Weight Matrices (di-PWMs) in a genomic sequence. The genomic sequence may contain positions with non-ATGC symbols, encoded with IUPAC.

JSON API: https://data.code.gouv.fr/api/v1/hosts/gite.lirmm.fr/repositories/rivals%2Fdipwmsearch

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License: cecill-b
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Dependencies parsed at: 4

Created at: almost 4 years ago
Updated at: 11 months ago
Pushed at: 11 months ago
Last synced at: 12 months ago

Topics: bioinformatics, computational biology, genomics