forge.ird.fr / diade / culebront_pipeline
dojo snakemake assemblage long reads
JSON API: https://data.code.gouv.fr/api/v1/hosts/forge.ird.fr/repositories/diade%2Fculebront_pipeline
Stars: 2
Forks: 0
Open issues:
License: gpl-3.0+
Language:
Dependencies parsed at:
15
Created at: over 3 years ago
Updated at: about 1 year ago
Pushed at: 11 months ago
Last synced at: 7 months ago
Topics: Genome assembly, Next-Generation Sequencing, Quality Control, Snakemake, reports
- snakemake *
- sphinx-rtd-theme ==1.2.0
- sphinx_copybutton *
- toml *
pyproject.toml
pypi
- biopython *
- ipython *
- matplotlib *
- nbformat *
- numpy *
- pandas *
- pysam *
- setuptools >=68.2.0
- snakecdysis >=1.0.0
- snakemake <=8
- tabulate *